Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015838729.1_cds_XP_016507064.1_20226
CDS Infomation

[gene=LOC107824767] [db_xref=GeneID:107824767] [protein=pollen receptor-like kinase 4] [protein_id=XP_016507064.1] [location=complement(join(3728..4079,4703..5030,5646..6242,8251..8908))] [gbkey=CDS]
Sequence

ATGGCTTCTTCAGCAAGAAACCATCACTACTTCCTGATCGTTCTCCTCGCGATGATATTA
TCATCATCGTCAGGACAAGAACCTGAATCCACTATCCTCCTGAAGTTCAAGTCTTCGCTA
GAAAACGCCACCTCATCACTTGGAAACTGGGATTCAAAGGTGCAACTTTGCAAAGGCAAC
TTTTCCAATTGGAAGGGATTGATTTGCTACAACGGAAAATTCACCGGTCTCCAACTAGAA
TCCATGGGATTATCAGGGACTCTTGACATCGACACACTTTCCCAATTGACTTCTTTACGT
ACCATAAGTGTCATGAACAATAACTTTGAAGGGCCATTTCCGGACGTGAAGAAAATTGGA
GGACTCAGAGGCGTCTACTTGTCGAATAACCGGTTTTCCGGTGAGTTGCCTGACGATGCC
TTTGCCGGAATGAAGTCAATTAGGAGAATTTTTTTGGCGAATAATAGGTTTACCGGCAAG
ATTCCGACGTCGTTATTGGGAATTCCGAAACTTGTAGAGTTGCAACTACAGGATAACCAG
TTTGATGGTAGCATACCGGCATTTACTCAGCAGGTTTTCCAATTAAATGTTGCAAATAAT
AGGCTTGAAGGTCCAATACCAGCTCAACTTAGCAGTCAAAGCTTAAGCTCATTTGCAGGA
AATGTGAACCTATGTGGTAAGCCAATGCCAGCATGTCCAGCTTCAAGGGAGGAACAAGGC
AATACTTCAAAGAATAAGAAAGGAATCCCAATAGTGGCCATAATCCTAGCAGTCATTGGT
GGATTACTCTTAGCAGCCATTATCATTGCTCTCTTTCTTCTCCGTAGGCAAAGGAAAAGA
CCGTCTCAGTATGAAAAATCATCAGTGAAAAATCTAAACAAATCAGAACCAAAGAAACGT
CCTTTGAGAGAAGACAAGTATGGAAGAAGTGAAAAGGGAAAGTTGTATTTTGTGAGAAGG
GATAGAGAAAAGTTTGATTTAGAAGATCTTCTTAGAGCACCAGCTGAGGTTTTGGGAAGT
GGAAGCTTTGGATCTACTTATAAAGCAGACCTTAATATTGGGAAACCTATAGCTGTGAGG
AGATTTAGACAAATGAGTAATATGGGTAAAGAAGATTTTCATGTACATATGAGAAGGCTT
GGCAAGTTGTCACATCCTAATATCCTTCCTCTTGTCGCTTTCTATTATACAAGGGAAGAA
AAGCTTTTGGTCACTGACTTTGCTGAAAACGGCAGCTTGGCTAGTCAACTATATGGGAAA
AGAGGTCCTAAGCAACCAAGTCTTGATTGGCCAAGTCGTTTAAAGATCATAAAAGGAATA
GCAAGGGGGTTGGCTTACCTCTACAAGGAGCTTCCTACATTGACACTCCCACATGGGCAT
CTTAAATCCTCCAATGTTGTATTAGACCACAGCTTTGAGCCACTTCTAGCAGACTATGCA
CTTGTGCCAGTCATCAATAAGGACCATGCCAAACAGTTCATGGTCGCCTACAAATCACCA
GAGTACATGCAAAACGAACGTCTTACTAGGAAGACTGATGTCTGGAGCCTTGGCATCCTC
ATCCTCGAGCTACTAACTGGCAGGTTCCCAGCAAATTATCTGAAACAAGGGAAAGGAGCA
AATGCAGACTTGGCAGCATGGGTGAACTCAGTGGTGAGAGAAGAGTGGACAGGCGAGGTT
TTCGATAAGGACATGAATACAAAAACCAAACACAATAGCGAAGGAGAAATGCTTAAGCTC
TTGAAGATTGGAATGTGCTGTTGTGAAATGGATGTTGGAAGGAGATGGGATTTGAGGGAA
GCCCTAGAGAAGATTGAAGAATTAAAAGAAAGGGATACTGAATATTCTTCTAATTATGCA
AGTGAAGGAGAAATTAATTACTCTTCGTCTAAAGCCATCAGTGATGAGGATTTCTCCTTT
ACTAACAAGGGTTAA

Peptide Sequence

PEP ID

XP_016507064.1
PEP Infomation

PREDICTED: pollen receptor-like kinase 4 [Nicotiana tabacum]
Sequence

MASSARNHHYFLIVLLAMILSSSSGQEPESTILLKFKSSLENATSSLGNWDSKVQLCKGN
FSNWKGLICYNGKFTGLQLESMGLSGTLDIDTLSQLTSLRTISVMNNNFEGPFPDVKKIG
GLRGVYLSNNRFSGELPDDAFAGMKSIRRIFLANNRFTGKIPTSLLGIPKLVELQLQDNQ
FDGSIPAFTQQVFQLNVANNRLEGPIPAQLSSQSLSSFAGNVNLCGKPMPACPASREEQG
NTSKNKKGIPIVAIILAVIGGLLLAAIIIALFLLRRQRKRPSQYEKSSVKNLNKSEPKKR
PLREDKYGRSEKGKLYFVRRDREKFDLEDLLRAPAEVLGSGSFGSTYKADLNIGKPIAVR
RFRQMSNMGKEDFHVHMRRLGKLSHPNILPLVAFYYTREEKLLVTDFAENGSLASQLYGK
RGPKQPSLDWPSRLKIIKGIARGLAYLYKELPTLTLPHGHLKSSNVVLDHSFEPLLADYA
LVPVINKDHAKQFMVAYKSPEYMQNERLTRKTDVWSLGILILELLTGRFPANYLKQGKGA
NADLAAWVNSVVREEWTGEVFDKDMNTKTKHNSEGEMLKLLKIGMCCCEMDVGRRWDLRE
ALEKIEELKERDTEYSSNYASEGEINYSSSKAISDEDFSFTNKG

Transcript Sequence

Gene sequence data has not been registered.